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How to Create a Nonprofit Document Retention Policy

A nonprofit document retention policy is a written schedule stating how long the organization keeps different types of records and how it destroys them once the retention period ends. Form 990's governance section asks whether an organization has one, and a federal law, 18 U.S.C. Section 1519, makes it a crime, punishable by up to 20 years in prison, to destroy records to obstruct any federal investigation, which applies to nonprofits too.

By LLC Register · Last reviewed October 2, 2026

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Key Takeaways

  • Form 990 asks whether you have one

    Form 990's governance section asks whether the organization has a written document retention and destruction policy, making this one of the more visible governance questions on the nonprofit's own public tax return, per the IRS.

  • Federal law criminalizes destroying records to obstruct an investigation

    18 U.S.C. Section 1519, added by the Sarbanes-Oxley Act, makes it a crime, punishable by up to 20 years in prison, to knowingly destroy, alter or falsify records with intent to impede a federal investigation, and it applies to any organization, not just public companies.

  • Financial records generally follow the IRS's own audit window

    The IRS generally keeps the right to audit a return for 3 years, 6 years if more than 25% of gross income was underreported, and indefinitely if no return was filed or the return was fraudulent, which is a reasonable baseline for how long to keep related financial records.

  • The policy needs both a schedule and a destruction step

    A document retention policy isn't complete with just a list of time periods; it also needs to say how records are actually destroyed once the period ends, and who is responsible for both steps.

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In this article
  • Comprehensive Guide
  • Practical Considerations

Comprehensive Guide

Why the IRS Asks About This on Form 990

Form 990's governance section asks whether the organization has a written document retention and destruction policy, per the IRS. The IRS doesn't require every nonprofit to adopt one as a matter of law, but answering "no" on a publicly available tax return is the kind of governance gap that board members, grantmakers and watchdog groups notice. A written policy also does something more concrete: it gives staff and volunteers clear, consistent rules for what to keep, for how long, and how to dispose of it, instead of ad hoc decisions made differently by whoever happens to be cleaning out a filing cabinet or an inbox.

The Federal Law That Makes This More Than a "Nice to Have"

Separate from the Form 990 question, a federal criminal statute makes document destruction a real legal risk, not just a governance best practice. 18 U.S.C. Section 1519, added by the Sarbanes-Oxley Act, makes it a crime to knowingly alter, destroy, conceal or falsify any record or document with intent to impede, obstruct or influence a federal investigation, punishable by up to 20 years in prison. Unlike most of the Sarbanes-Oxley Act, which applies only to publicly traded companies, this particular provision applies broadly to any organization, including a nonprofit. A documented, routinely followed retention policy, paired with a clear rule to stop any destruction once litigation or an investigation is reasonably anticipated, is the practical way an organization protects itself and its staff from this exposure.

What to Include in a Document Retention Policy

A usable policy generally covers:

  • Categories of documents the organization creates or receives, such as corporate records, financial records, personnel records, donor records, grant and contract files, and electronic records and email.
  • A retention period for each category, stated as either a specific number of years or "permanent."
  • Who is responsible for storing, and eventually destroying, each category, by role (such as the finance staff for financial records, HR for personnel files).
  • A litigation or investigation hold provision, stating that normal destruction schedules are suspended for any document reasonably related to pending or anticipated litigation, an audit, or a government investigation, regardless of what the regular schedule would otherwise allow.
  • A destruction method, such as shredding for paper and secure deletion for electronic files, so the policy actually addresses disposal, not just storage.

Common Retention Periods to Start From

While the right schedule depends on your organization's specific records and any grant or state requirements that apply to you, a few categories have a reasonably well-established baseline:

  • Permanent: articles of incorporation, bylaws, the IRS determination letter, board meeting minutes, and the organization's own policies.
  • 7 years: financial statements, bank records, and documents supporting a tax return or Form 990, reflecting that the IRS generally keeps the right to audit a return for 3 years, extended to 6 years if more than 25% of gross income was underreported, and indefinitely if no return was filed or the return was fraudulent, per the IRS.
  • 3 to 7 years: routine correspondence, employment applications for non-hired candidates, and expired contracts, depending on your state's statute of limitations for related claims.

Adopting and Enforcing the Policy

Have the board formally adopt the policy by resolution, the same as any other governance policy, and store the adopted version where staff can actually find it, not just in a board binder. Train new staff and volunteers on it as part of onboarding, and revisit it periodically, since recordkeeping systems and legal requirements both change over time.

Electronic Records Need the Same Discipline as Paper

Email, shared drives, donor databases and cloud storage all count as records under most retention policies and under 18 U.S.C. Section 1519 itself; the statute doesn't distinguish between paper and electronic formats. Make sure your IT setup, including automatic email deletion rules or cloud storage expiration settings, doesn't quietly destroy records your written policy says to keep, or keep records past when your policy says to delete them.

Practical Considerations

A Litigation or Investigation Hold Always Overrides the Normal Schedule

The moment your organization reasonably anticipates litigation, an audit, or a government investigation touching specific records, normal destruction of those records needs to stop immediately, even if your written schedule would otherwise call for disposal. This is the exact scenario 18 U.S.C. Section 1519 is aimed at, and it is the one place where strictly following your own written schedule is not a defense if you knew a hold should have applied.

Don't Set a Shorter Period Than a Grant or State Law Requires

Some grant agreements and state charitable-registration rules specify their own minimum recordkeeping periods for grant-related records, which can be longer than your organization's general schedule. Check grant terms and your state's requirements before finalizing retention periods for grant-funded programs, rather than applying a single generic schedule to everything.

Revisit the Policy as Your Systems Change

A policy written when your nonprofit kept everything on paper may not map cleanly onto cloud storage, shared drives, and a donor database years later. Review the policy periodically, especially after a major change in your recordkeeping systems or software, to make sure the categories and storage locations it describes still match reality.

This Is Not Legal Advice

What your organization is legally required to retain, for how long, and what counts as reasonably anticipated litigation for hold purposes depends on your specific circumstances and state law. Talk to a nonprofit attorney when drafting your policy, and especially before destroying any records once a dispute, audit or investigation becomes a realistic possibility.

Related Resources

  • Top 10 Nonprofit Board Responsibilities

    Learn the top 10 responsibilities of a nonprofit board, including financial oversight, hiring the executive director, legal compliance, and fundraising.

  • How to Create a Nonprofit Whistleblower Policy

    Learn how to create a nonprofit whistleblower policy that satisfies Form 990's governance question, with the three elements the IRS looks for.

  • How to Create a Nonprofit Conflict of Interest Policy

    Learn how to create a nonprofit conflict of interest policy, including the parts the IRS looks for, its sample language, and how to apply it in practice.

Sources

The official sources used for this article.

IRS: Instructions for Form 990 (governance, Part VI)

irs.gov/instructions/i990

IRS: How long should I keep records

irs.gov/businesses/small-businesses-self-employed/how-long-should-i-keep-records

U.S. Code: 18 U.S.C. Section 1519 (destruction, alteration or falsification of records)

govinfo.gov/content/pkg/USCODE-2021-title18/html/USCODE-2021-title18-partI-chap73-sec1519.htm

Created by: LLC RegisterLast reviewed October 2, 2026

Updated: October 2, 2026

Frequently Asked Questions

Does the IRS require a nonprofit to have a document retention policy?

Not as a strict legal mandate, but Form 990's governance section asks whether the organization has a written document retention and destruction policy, per the IRS, and most nonprofits adopt one both to answer that question well and to give staff clear recordkeeping rules.

What happens if a nonprofit destroys records during a federal investigation?

It can be a federal crime. 18 U.S.C. Section 1519 makes it punishable by up to 20 years in prison to knowingly destroy, alter or conceal records with intent to impede a federal investigation, and this law applies to any organization, including a nonprofit, not just public companies.

How long should a nonprofit keep its financial records and tax filings?

A common baseline is 7 years, reflecting that the IRS generally has 3 years to audit a return, extended to 6 years for substantial underreported income, and indefinitely if no return was filed or the return was fraudulent, per the IRS. Permanent records like articles of incorporation and the IRS determination letter should be kept forever.

Does a document retention policy need to cover email and electronic files?

Yes. Email, shared drives, donor databases and cloud storage are all records for retention purposes, and the federal law against destroying records to obstruct an investigation applies to electronic documents the same as paper ones. Make sure automatic deletion settings in your organization's software don't conflict with your written retention schedule.

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